ECOL 335: Evolutionary Biology (Spring 2008)
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Schedule for 335: Evolutionary Biology

Date Topic Lecture slides LECTURE Readings DISCUSSION Readings Homework
1/17 #1 Class Introduction 2/page, 4/page   Tips for paper presentation  
1/22 #2 History, evidence 2/page, 4/page Text - Ch. 2 pp. 37-72 Ayala 2007
Text: Chapter 1 (HIV)
 
1/24 #3 Variation, H-W equilibrium 2/page, 4/page Text - Ch. 5 pp. 143-168 & Ch. 6 pp. 169-182
1/29 #4 Drift, Migration 2/page, 4/page Text - Ch. 7 pp. 223-249 Exercises to solve in class Homework #1
Due 2/5
1/31 #5 Mutation, Molecular Evolution 1 2/page, 4/page Text – Ch. 6 pp.  210-212 & Ch. 7 pp. 249-256  
2/5 #6 Darwinian Natural Selection 2/page, 4/page Text - Ch. 3 pp. 73-109 Clegg 2002
Kumar 2005
Homework #2
Due 2/12

(H #1 DUE)
H#1 KEY
2/7 #7 Natural selection 1 2/page, 4/page Text – Ch. 9 pp. 346-350 & Ch. 6 pp. 182-194  
2/12 #8 Natural selection 2 2/page, 4/page Text - Ch. 6. pp. 194-222 Grant 2002
Phillips 2004
Optional:
Grant 2006
(H #2 DUE)
H#2 KEY
2/14 EXAM 1 EXAM 1 KEY

Study guide
Practice exam
 
2/19 #9 Sexual selection, Molecular Evolution 2 2/page, 4/page Ch. 11 pp. 401-446 & Ch. 7 pp. 256-264 Hori 1993
Umina 2005
 
2/21 #10 Adaptation 2/page, 4/page Ch.10 pp.  363-400 Homework #3
Due 2/28
2/26 #11 Non-random mating,Conservation Genetics 2/page, 4/page
Fig wasp video
YouTube video
Text - Ch. 7. pp. 264-280 Fisher 2006
Gilbert 2005
Optional:
Bradbury 2005
Gould & Lewontin (spandrels)
 
2/28 #12 Quantitative Genetics

2/page,4/page,

Text - Ch. 9. pp. 319-359 Homework #4
Due 3/6
(H #3 DUE)
H#3 KEY
3/4 #13 Evolution at two loci

2/page, 4/page

Text - Ch. 8. pp. 281-302 Vila 2003
Palumbi 2001
 
3/6 #14 Evolution of social behavior, Kin selection 2/page, 4/page Text - Ch. 12. pp. 447-482 (H #4 DUE)
H#4 KEY
3/11 #15 Adaptive significance of sex 2/page, 4/page Text - Ch. 8. pp. 302-317 No meeting
3/13 EXAM 2 EXAM 2 KEY Study guide
Practice exam
 
SPRING BREAK
3/25 #16 Speciation I - Concepts & mechanisms

2/page, 4/page

Text - Ch. 16 pp. 605-628

Delimiting Species - Sites and Species Concept - Hey

 
3/27 #17 Speciation II - Genetics

2/page, 4/page

Text - Ch. 16 pp. 629-637  

Homework#5

Due April 3

4/1

#18 Phylogenetics I: Cladistics, Parsimony

Read what you can in Lewis & Holder

2/page, 4/page

Text - Ch. 4 pp. 111-130

Phylogenetics Faint Heart

Holder&Lewis - lots of detail

Assessing Trees Xtra
4/3 #19 Phylogenetics II: Characters, Adaptation

2/page, 4/page

Building Trees (extra practice problems)

Text - Ch. 4 pp. 130-140  

Homework#5-Key

Homework#6 - due April 10

4/8

#20 Development and Evolution

Phylogenomics - Moved to 4/29

2/page, 4/page

Text Ch. 19

pp 725-752

Development - Mabee

Breuker - Evo-Devo

 
4/10 #21 Aging and Life History Traits

2/page, 4/page

Text - Ch. 13

pp 483-528

  HW #6 - DUE
H#6-Key
4/15

EXAM #3

KEY TO EXAM 3

Practice Exam 3 STUDY GUIDE EXAM 3 No discussion  
4/17 #22 Historical Evol I: Precambrian and origins 2/page, 4/page

Text - Ch. 17

pp 639-687

No discussion  
4/22 #23 Historical Evol II: Cambrian to present

2/page, 4/page

TIME SCALE

Text - Ch. 18

pp 689-708

Origins Life

RNA & Archea

HW #7 - due April 29
4/24 #24 Historical Evol III: Extinctions and MacroEvolution 2/page, 4/page

Text - Ch. 18

pp 709-724

   
4/29

#25 Phylogenomics

Developmental Evolution & Genetics - moved to 4/8

2/page,

4/page

Text - Ch. 15

pp 575-602

Mammals / Dinosaurs

Once We Were Not Alone

HW #7 KEY

HW #8 - due May 6

5/1 #26 Human and Cultural Evolution 2/page, 4/page

Text - Ch. 20

pp 753-798

   
5/6 #27 Human Evol: Health & Adaptation 2/page, 4/page

Text - Ch. 14

pp 529-573

  HW #8 - KEY
MAY 13

EXAM #4 -

STUDY GUIDE HERE

EXAM REVIEW #1 (Joel) - Friday BSW 237 2:00-3:30

EXAM REVIEW #2 (Peter) - Monday - BSW 208 2:00-3:30

Rm 301 BSW 11:00 - 12:30

NOTE: STUDY GUIDE IS A GUIDE - You need to know details